Changelog

Source: NEWS.md

ceas 1.0.0

CRAN release: 2024-05-07

• First CRAN release.

ceas 0.3.3

• Don’t divide by 0 when normalizing if already 0; PER is now normalized with OCR and ECAR.

ceas 0.3.2

• Warn if data are not normalized by checking that the “Background” group’s OCR, ECAR, and PER values are 0.

ceas 0.3.1

• Add assay type as argument to plot ECAR/OCR meaningfully as all assay types were previously being summarized instead of just one.

ceas 0.3.0

• Add normalize(), a cell count/protein mass normalization function. read_data now can take a csv file with cell counts or protein mass ($\mu$g) for each of the experimental groups to normalize the data. An example csv is provided below for a dataset with 4 experimental groups:

  exp_group	measure
  Group_1	30000
  Group_2	30000
  Group_3	5000
  Group_4	5000

ceas 0.2.0

• Add delimiter between group and assay labels as argument in read_data() to support delimiters other than .

ceas 0.1.1

• Fix the calculation of coupled mitochondrial respiration (#4). This correction was published in https://doi.org/10.1074/jbc.AAC118.004855.

ceas 0.1.0

First release before initial submission for publication.