Package index • ceas

Data import

read_data(): Read Seahorse Wave Excel File

normalize(): Normalize Seahorse data

partition_data(): Organize Seahorse Data

Energetics calculations

get_energetics(): Calculate ATP Production from OXPHOS and Glycolysis

fit_lme(): Estimate mean and confidence intervals using a mixed-effects model

get_energetics_summary(): Calculate ATP Production Mean and Standard Deviation

get_rate_summary(): Rates summary

energetics_ols_summary(): Get ordinary least squares mean and confidence intervals from energetics

energetics_lme_summary(): Get mean and confidence intervals from energetics mixed-effects models

rates_lme_summary(): Estimate mean and confidence intervals for ATP measures using a mixed-effects model

Plotting

bioscope_plot(): Bioenergetic Scope Plot

rate_plot(): Rate plot

atp_plot(): ATP Plot

make_bioscope_plot(): Bioenergetic Scope Plot Shortcut